Mapped reads for uncultivated Porticoccaceae bacterium UBA9550 genome... - SRA

SRX3572916: Mapped reads for uncultivated Porticoccaceae bacterium UBA9550 genome recovered from ERX943717
1 ILLUMINA (Illumina HiSeq 1000) run: 212,009 spots, 41.5M bases, 20.8Mb downloads

Design: Reads from ERX943717 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA9550 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

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Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Porticoccaceae bacterium UBA9550 genome recovered from ERX943717

SAMN08018283 • SRS2843889 • All experiments • All runs

Organism: Porticoccaceae bacterium

Library:

Name: UBA9550_library

Instrument: Illumina HiSeq 1000

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 212,009 spots, 41.5M bases, 20.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR6483058	212,009	41.5M	20.8Mb	2018-03-05

ID:: 4958418

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Sequence Read Archive

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